Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | C1O30_RS10605 | Not Available | Negative | 2323465 - 2324976 | 55941.3 |
| ribulokinase | C1O30_RS10610 | Not Available | Negative | 2325031 - 2326716 | 61128.6 |
| arabinose abc transporter substrate-binding protein | C1O30_RS10615 | Not Available | Positive | 2327099 - 2328082 | 35491.0 |
| l-arabinose abc transporter atp-binding protein arag | C1O30_RS10620 | Not Available | Positive | 2328171 - 2329694 | 55574.3 |
| l-arabinose abc transporter permease arah | C1O30_RS10625 | Not Available | Positive | 2329713 - 2330699 | 34303.1 |
| arabinose operon transcriptional regulator arac | C1O30_RS10630 | Not Available | Positive | 2330769 - 2331722 | 36558.9 |
| oxidoreductase | C1O30_RS10635 | Not Available | Positive | 2331962 - 2333011 | 38718.2 |
| bile acid:sodium symporter family protein | C1O30_RS10640 | Not Available | Positive | 2333165 - 2334160 | 35602.0 |
| sgcj/ecac family oxidoreductase | C1O30_RS10645 | Not Available | Positive | 2334329 - 2334787 | 16952.0 |
| adenosine deaminase | C1O30_RS10650 | Not Available | Negative | 2334891 - 2335907 | 37616.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
