Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase rnm | C1O30_RS10510 | Not Available | Positive | 2302263 - 2303135 | 31718.1 |
| l-threonylcarbamoyladenylate synthase | C1O30_RS10515 | Not Available | Positive | 2303326 - 2303946 | 23244.1 |
| 23s rrna pseudouridine(2605) synthase rlub | C1O30_RS10520 | Not Available | Positive | 2304160 - 2305050 | 33490.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | C1O30_RS10525 | Not Available | Negative | 2305144 - 2305734 | 22019.3 |
| ycik family oxidoreductase | C1O30_RS10530 | Not Available | Negative | 2305768 - 2306529 | 27888.8 |
| protease sohb | C1O30_RS10535 | Not Available | Positive | 2306812 - 2307858 | 39151.4 |
| yola family protein | C1O30_RS10540 | Not Available | Negative | 2308130 - 2308726 | 21186.7 |
| ycin family protein | C1O30_RS10545 | Not Available | Negative | 2309122 - 2309391 | 10172.2 |
| hypothetical protein | C1O30_RS21760 | Not Available | Positive | 2309532 - 2309666 | 5015.18 |
| type i dna topoisomerase | C1O30_RS10550 | Not Available | Positive | 2309832 - 2312453 | 97780.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
