Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycic family protein | C1O30_RS10460 | Not Available | Negative | 2291833 - 2292585 | 26889.4 |
| ykgj family cysteine cluster protein | C1O30_RS10465 | Not Available | Negative | 2292700 - 2293068 | 13126.5 |
| outer membrane protein ompw | C1O30_RS10470 | Not Available | Positive | 2293351 - 2293983 | 22898.5 |
| oligogalacturonate-specific porin kdgm family protein | C1O30_RS10475 | Not Available | Negative | 2294052 - 2294774 | 27879.6 |
| tryptophan synthase subunit alpha | C1O30_RS10480 | Not Available | Negative | 2295319 - 2296128 | 28853.7 |
| tryptophan synthase subunit beta | C1O30_RS10485 | Not Available | Negative | 2296128 - 2297321 | 43050.7 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | C1O30_RS10490 | Not Available | Negative | 2297337 - 2298722 | 50015.7 |
| is3 family transposase | C1O30_RS21600 | Not Available | Negative | 2298731 - 2300326 | 57021.8 |
| anthranilate synthase component 1 | C1O30_RS10505 | Not Available | Negative | 2300326 - 2301888 | 57867.2 |
| hypothetical protein | C1O30_RS21755 | Not Available | Positive | 2301948 - 2302073 | 4708.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
