Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase rssa | C1O30_RS10360 | Not Available | Positive | 2268977 - 2269885 | 33523.9 |
| two-component system response regulator rssb | C1O30_RS10365 | Not Available | Positive | 2269945 - 2270961 | 37476.6 |
| utp--glucose-1-phosphate uridylyltransferase galu | C1O30_RS10370 | Not Available | Positive | 2271164 - 2272075 | 33259.4 |
| histone-like nucleoid-structuring protein h-ns | C1O30_RS10375 | Not Available | Negative | 2272507 - 2272914 | 15416.4 |
| thymidine kinase | C1O30_RS10380 | Not Available | Positive | 2273296 - 2273895 | 22406.8 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | C1O30_RS10385 | Not Available | Negative | 2274439 - 2277141 | 97151.8 |
| yche family naat transporter | C1O30_RS10395 | Not Available | Positive | 2277699 - 2278343 | 23108.0 |
| oligopeptide abc transporter substrate-binding protein oppa | C1O30_RS10400 | Not Available | Positive | 2279484 - 2281127 | 61370.4 |
| oligopeptide abc transporter permease oppb | C1O30_RS10405 | Not Available | Positive | 2281228 - 2282148 | 33449.2 |
| oligopeptide abc transporter permease oppc | C1O30_RS10410 | Not Available | Positive | 2282161 - 2283069 | 33290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
