Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | C1O30_RS10310 | Not Available | Negative | 2258850 - 2259869 | 37090.3 |
| signal peptide peptidase sppa | C1O30_RS10315 | Not Available | Negative | 2259989 - 2261839 | 67488.5 |
| nad(p)h nitroreductase | C1O30_RS10320 | Not Available | Positive | 2262087 - 2262638 | 19920.9 |
| dna topoisomerase iii | C1O30_RS10325 | Not Available | Positive | 2262722 - 2264647 | 72522.1 |
| duf1496 domain-containing protein | C1O30_RS21705 | Not Available | Positive | 2264812 - 2265090 | 9937.7 |
| exodeoxyribonuclease iii | C1O30_RS10335 | Not Available | Negative | 2265127 - 2265933 | 30734.4 |
| trimeric intracellular cation channel family protein | C1O30_RS10340 | Not Available | Positive | 2266292 - 2266912 | 22644.5 |
| Trna-tyr | Not Available | Not Available | Positive | 2267092 - 2267176 | Not Available |
| formyltetrahydrofolate deformylase | C1O30_RS10350 | Not Available | Negative | 2267342 - 2268193 | 32290.1 |
| ychj family protein | C1O30_RS10355 | Not Available | Negative | 2268271 - 2268738 | 17804.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
