Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1O30_RS00675 | Not Available | Positive | 158699 - 159463 | 27236.3 |
| hypothetical protein | C1O30_RS00680 | Not Available | Positive | 159482 - 160243 | 27018.1 |
| abc transporter atp-binding protein | C1O30_RS00685 | Not Available | Positive | 160337 - 161041 | 25461.7 |
| abc transporter permease | C1O30_RS00690 | Not Available | Positive | 161034 - 162254 | 43309.5 |
| tolc family protein | C1O30_RS00695 | Not Available | Positive | 162247 - 163725 | 54722.9 |
| hlyd family secretion protein | C1O30_RS00700 | Not Available | Positive | 163718 - 164980 | 46178.6 |
| duf2645 family protein | C1O30_RS00705 | Not Available | Negative | 165093 - 165398 | 12337.5 |
| hypothetical protein | C1O30_RS00710 | Not Available | Negative | 165400 - 166104 | 26448.6 |
| hcp family type vi secretion system effector | C1O30_RS00715 | Not Available | Negative | 166114 - 166593 | 17994.4 |
| isoaspartyl peptidase/l-asparaginase family protein | C1O30_RS00720 | Not Available | Negative | 166838 - 167803 | 33870.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
