Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | C1O30_RS10160 | Not Available | Negative | 2228624 - 2230066 | 51467.4 |
| murr/rpir family transcriptional regulator | C1O30_RS10165 | Not Available | Negative | 2230251 - 2231120 | 32248.7 |
| glucose-6-phosphate dehydrogenase | C1O30_RS10170 | Not Available | Positive | 2231486 - 2232961 | 55767.6 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | C1O30_RS10175 | Not Available | Positive | 2233116 - 2233757 | 22171.1 |
| formate-dependent phosphoribosylglycinamide formyltransferase | C1O30_RS10180 | Not Available | Negative | 2233852 - 2235030 | 42371.0 |
| s9 family peptidase | C1O30_RS10185 | Not Available | Positive | 2235308 - 2237359 | 78500.9 |
| dna polymerase iii subunit theta | C1O30_RS10190 | Not Available | Negative | 2237943 - 2238173 | 9045.7 |
| copper homeostasis periplasmic binding protein copc | C1O30_RS10195 | Not Available | Positive | 2238335 - 2238715 | 13491.2 |
| copper homeostasis membrane protein copd | C1O30_RS10200 | Not Available | Positive | 2238734 - 2239612 | 31809.1 |
| non-heme ferritin | C1O30_RS10205 | Not Available | Positive | 2239919 - 2240428 | 19418.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
