Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | C1O30_RS10060 | Not Available | Positive | 2210239 - 2210811 | 21147.2 |
| copper homeostasis protein cutc | C1O30_RS10065 | Not Available | Positive | 2211093 - 2211857 | 27617.5 |
| hypothetical protein | C1O30_RS10070 | Not Available | Positive | 2212135 - 2212431 | 11198.5 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | C1O30_RS10075 | Not Available | Negative | 2212525 - 2213496 | 36731.4 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | C1O30_RS10080 | Not Available | Negative | 2213493 - 2214236 | 27854.6 |
| mapeg family protein | C1O30_RS10085 | Not Available | Negative | 2214370 - 2214765 | 15028.2 |
| duf72 domain-containing protein | C1O30_RS10090 | Not Available | Negative | 2215021 - 2215833 | 31284.2 |
| aspartate--trna ligase | C1O30_RS10095 | Not Available | Positive | 2216160 - 2217950 | 66542.9 |
| dihydroneopterin triphosphate diphosphatase | C1O30_RS10100 | Not Available | Positive | 2217952 - 2218401 | 17326.5 |
| yebc/pmpr family dna-binding transcriptional regulator | C1O30_RS10105 | Not Available | Positive | 2218473 - 2219216 | 26363.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
