Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comec family protein | C1O30_RS09860 | Not Available | Positive | 2162700 - 2164895 | 82591.1 |
| lipid a abc transporter atp-binding protein/permease msba | C1O30_RS09865 | Not Available | Positive | 2164934 - 2166682 | 63995.0 |
| tetraacyldisaccharide 4'-kinase | C1O30_RS09870 | Not Available | Positive | 2166679 - 2167692 | 37120.1 |
| trm112 family protein | C1O30_RS09875 | Not Available | Positive | 2167732 - 2167914 | 6705.18 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | C1O30_RS09880 | Not Available | Positive | 2167911 - 2168663 | 27539.0 |
| pectate lyase peln | C1O30_RS09885 | Not Available | Positive | 2169025 - 2170344 | 47268.9 |
| ycbj family phosphotransferase | C1O30_RS09890 | Not Available | Positive | 2170632 - 2171528 | 34696.0 |
| envelope biogenesis factor elyc | C1O30_RS09895 | Not Available | Negative | 2171601 - 2172380 | 28415.8 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | C1O30_RS09900 | Not Available | Positive | 2172533 - 2173318 | 29452.7 |
| chromosome partition protein mukf | C1O30_RS09905 | Not Available | Positive | 2173315 - 2174637 | 50097.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
