Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc/yloc family endoribonuclease | C1O30_RS00625 | Not Available | Negative | 147774 - 148637 | 33065.8 |
| lysr family transcriptional regulator | C1O30_RS00630 | Not Available | Negative | 148767 - 149675 | 33833.6 |
| dipeptidase | C1O30_RS00635 | Not Available | Negative | 149803 - 150885 | 38768.1 |
| abc transporter substrate-binding protein | C1O30_RS00640 | Not Available | Positive | 151086 - 152681 | 59129.4 |
| abc transporter permease | C1O30_RS00645 | Not Available | Positive | 152681 - 153691 | 36479.4 |
| nickel transporter permease | C1O30_RS00650 | Not Available | Positive | 153688 - 154590 | 32762.9 |
| abc transporter atp-binding protein | C1O30_RS00655 | Not Available | Positive | 154591 - 155421 | 30375.1 |
| abc transporter atp-binding protein | C1O30_RS00660 | Not Available | Positive | 155434 - 156174 | 27630.4 |
| serine hydrolase domain-containing protein | C1O30_RS00665 | Not Available | Positive | 156171 - 157682 | 53926.2 |
| hypothetical protein | C1O30_RS00670 | Not Available | Positive | 158101 - 158571 | 16418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
