Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C1O30_RS09665 | Not Available | Positive | 2118130 - 2119038 | 33405.4 |
| mfs transporter | C1O30_RS09670 | Not Available | Positive | 2119180 - 2120328 | 41257.4 |
| lysr family transcriptional regulator | C1O30_RS09675 | Not Available | Negative | 2120351 - 2121280 | 34807.0 |
| pyruvate formate lyase 1-activating protein | C1O30_RS09680 | Not Available | Negative | 2121813 - 2122553 | 28037.4 |
| formate c-acetyltransferase | C1O30_RS09685 | Not Available | Negative | 2122856 - 2125138 | 84986.4 |
| formate transporter foca | C1O30_RS09690 | Not Available | Negative | 2125195 - 2126052 | 30877.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | C1O30_RS09695 | Not Available | Negative | 2126688 - 2128451 | 65797.2 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | C1O30_RS09700 | Not Available | Positive | 2128716 - 2129801 | 39971.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C1O30_RS09705 | Not Available | Positive | 2129911 - 2131200 | 46393.5 |
| (d)cmp kinase | C1O30_RS09710 | Not Available | Positive | 2131422 - 2132108 | 24920.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
