Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | C1O30_RS21865 | Not Available | Positive | 2105878 - 2106315 | 15810.6 |
| is3 family transposase | C1O30_RS21870 | Not Available | Positive | 2107105 - 2109513 | 87750.5 |
| outer membrane lipoprotein chaperone lola | C1O30_RS09625 | Not Available | Positive | 2109703 - 2110317 | 22375.0 |
| replication-associated recombination protein a | C1O30_RS09630 | Not Available | Positive | 2110325 - 2111668 | 49605.2 |
| serine--trna ligase | C1O30_RS09635 | Not Available | Positive | 2111774 - 2113069 | 48872.6 |
| is4 family transposase | C1O30_RS09640 | Not Available | Negative | 2113121 - 2114443 | 50511.3 |
| tat proofreading chaperone dmsd | C1O30_RS09645 | Not Available | Positive | 2114776 - 2115390 | 23812.6 |
| glutathione s-transferase family protein | C1O30_RS09650 | Not Available | Negative | 2115467 - 2116072 | 23119.0 |
| dsba family protein | C1O30_RS09655 | Not Available | Negative | 2116220 - 2116864 | 24132.9 |
| mbl fold metallo-hydrolase | C1O30_RS09660 | Not Available | Negative | 2117152 - 2118027 | 31697.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
