Dickeya zeae str. MS2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya zeae
StrainMS2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya zeae strain MS2 chromosome, complete genome.

Gene Summary

Adenine Count

1103787 bp

Thymine Count

1102832 bp

Guanine Count

1265585 bp

Cytosine Count

1267848 bp

Genome Length

4740052 bp

Protein-coding Genes

4086 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
grxa family glutaredoxinC1O30_RS09470Not AvailableNegative2073386 - 20736439714.49
oxygen-insensitive nadph nitroreductaseC1O30_RS09475Not AvailablePositive2074139 - 207486127047.4
30s ribosomal protein s6--l-glutamate ligaseC1O30_RS09480Not AvailablePositive2074874 - 207577632391.4
ybjn domain-containing proteinC1O30_RS09485Not AvailablePositive2075956 - 207643517711.3
spermidine/putrescine abc transporter substrate-binding protein potfC1O30_RS09490Not AvailablePositive2076837 - 207794640950.8
putrescine abc transporter atp-binding subunit potgC1O30_RS09495Not AvailablePositive2078063 - 207919041695.7
putrescine abc transporter permease pothC1O30_RS09500Not AvailablePositive2079206 - 208016535841.0
putrescine abc transporter permease potiC1O30_RS09505Not AvailablePositive2080162 - 208100730534.2
ybjo family proteinC1O30_RS09510Not AvailablePositive2081116 - 208156816697.0
23s rrna (uracil(747)-c(5))-methyltransferase rlmcC1O30_RS09515Not AvailablePositive2081633 - 208276342010.8

Displaying genes 1921 – 1930 of 4237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.