Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane permeability protein sana | C1O30_RS09420 | Not Available | Negative | 2062274 - 2063029 | 28639.7 |
| 30s ribosomal protein s12 methylthiotransferase rimo | C1O30_RS09425 | Not Available | Negative | 2063217 - 2064620 | 52060.2 |
| pqq-dependent sugar dehydrogenase | C1O30_RS09430 | Not Available | Positive | 2064889 - 2066016 | 41002.9 |
| glutathione s-transferase family protein | C1O30_RS09435 | Not Available | Negative | 2066091 - 2066708 | 23248.8 |
| alpha/beta fold hydrolase | C1O30_RS09440 | Not Available | Negative | 2067016 - 2067834 | 31264.6 |
| serine hydrolase | C1O30_RS09445 | Not Available | Positive | 2068355 - 2069563 | 43592.5 |
| dna-binding transcriptional repressor deor | C1O30_RS09450 | Not Available | Negative | 2069615 - 2070385 | 27809.6 |
| aspartate:alanine antiporter | C1O30_RS09455 | Not Available | Negative | 2070917 - 2072605 | 60750.5 |
| hypothetical protein | C1O30_RS09460 | Not Available | Positive | 2072690 - 2072965 | 10189.2 |
| inner membrane protein ybjm | C1O30_RS09465 | Not Available | Positive | 2072952 - 2073323 | 13978.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
