Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ofa family mfs transporter | C1O30_RS09210 | Not Available | Positive | 2014541 - 2015758 | 43100.9 |
| 50s ribosomal protein l25 | C1O30_RS09215 | Not Available | Negative | 2015943 - 2016230 | 10656.0 |
| dead/deah box helicase | C1O30_RS09220 | Not Available | Negative | 2016512 - 2018272 | 66569.5 |
| yech family metal-binding protein | C1O30_RS09225 | Not Available | Negative | 2018272 - 2018511 | 8738.4 |
| 16s rrna pseudouridine(516) synthase rsua | C1O30_RS09230 | Not Available | Positive | 2018788 - 2019486 | 26154.1 |
| bcr/cfla family multidrug efflux mfs transporter | C1O30_RS09235 | Not Available | Positive | 2019595 - 2020785 | 43239.4 |
| yejg family protein | C1O30_RS09245 | Not Available | Positive | 2021139 - 2021483 | 12880.4 |
| microcin c abc transporter atp-binding protein yejf | C1O30_RS09250 | Not Available | Negative | 2021557 - 2023149 | 59272.1 |
| abc transporter permease | C1O30_RS09255 | Not Available | Negative | 2023151 - 2024176 | 38239.9 |
| microcin c abc transporter permease yejb | C1O30_RS09260 | Not Available | Negative | 2024173 - 2025267 | 40403.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
