Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1O30_RS09160 | Not Available | Negative | 2006230 - 2006457 | 8587.83 |
| duf2778 domain-containing protein | C1O30_RS09165 | Not Available | Negative | 2006454 - 2006975 | 19445.2 |
| hcp family type vi secretion system effector | C1O30_RS09170 | Not Available | Negative | 2007070 - 2007549 | 18189.4 |
| abc transporter atp-binding protein/permease | C1O30_RS09175 | Not Available | Negative | 2007908 - 2008150 | 9022.51 |
| Trna-pro | Not Available | Not Available | Positive | 2008393 - 2008469 | Not Available |
| lps biosynthesis-modulating metalloenzyme yejm | C1O30_RS09185 | Not Available | Negative | 2008548 - 2010320 | 67232.5 |
| yejl family protein | C1O30_RS09190 | Not Available | Negative | 2010334 - 2010564 | 8373.97 |
| nucleoid-associated protein yejk | C1O30_RS09195 | Not Available | Positive | 2010727 - 2011737 | 37863.6 |
| sensor histidine kinase | C1O30_RS09200 | Not Available | Positive | 2011882 - 2013594 | 63705.9 |
| lytr/algr family response regulator transcription factor | C1O30_RS09205 | Not Available | Positive | 2013607 - 2014344 | 28853.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
