Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine exporter rhta | C1O30_RS09060 | Not Available | Negative | 1989226 - 1990107 | 30623.8 |
| outer membrane protein ompx | C1O30_RS09065 | Not Available | Positive | 1990481 - 1990996 | 18415.3 |
| marr family winged helix-turn-helix transcriptional regulator | C1O30_RS09070 | Not Available | Negative | 1991066 - 1991560 | 18921.6 |
| cynx/nimt family mfs transporter | C1O30_RS09075 | Not Available | Positive | 1991657 - 1992838 | 41176.1 |
| lysr family transcriptional regulator | C1O30_RS09080 | Not Available | Negative | 1992835 - 1993749 | 34482.5 |
| 5-oxoprolinase subunit pxpa | C1O30_RS09085 | Not Available | Positive | 1993877 - 1994659 | 28877.4 |
| acetyl-coa carboxylase | C1O30_RS09090 | Not Available | Positive | 1994689 - 1994937 | 8932.73 |
| acetyl-coa carboxylase biotin carboxylase subunit | C1O30_RS09095 | Not Available | Positive | 1994991 - 1996379 | 50416.1 |
| 5-oxoprolinase subunit b family protein | C1O30_RS09100 | Not Available | Positive | 1996381 - 1997265 | 33033.5 |
| biotin-dependent carboxyltransferase family protein | C1O30_RS09105 | Not Available | Positive | 1997252 - 1998259 | 35730.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
