Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase ding | C1O30_RS09010 | Not Available | Positive | 1975373 - 1977478 | 79742.5 |
| yfap family protein | C1O30_RS09015 | Not Available | Positive | 1977652 - 1978818 | 42422.1 |
| dna-binding protein ybib | C1O30_RS09020 | Not Available | Positive | 1978991 - 1979959 | 35747.2 |
| m3 family metallopeptidase | C1O30_RS09025 | Not Available | Positive | 1979990 - 1981855 | 70795.3 |
| acid phosphatase | C1O30_RS09030 | Not Available | Positive | 1982124 - 1983401 | 46227.5 |
| duf1349 domain-containing protein | C1O30_RS09035 | Not Available | Negative | 1983503 - 1985245 | 62151.8 |
| glutamine abc transporter atp-binding protein glnq | C1O30_RS09040 | Not Available | Negative | 1985479 - 1986201 | 26589.3 |
| glutamine abc transporter permease glnp | C1O30_RS09045 | Not Available | Negative | 1986198 - 1986857 | 24062.6 |
| glutamine abc transporter substrate-binding protein glnh | C1O30_RS09050 | Not Available | Negative | 1987012 - 1987758 | 27117.4 |
| dna starvation/stationary phase protection protein dps | C1O30_RS09055 | Not Available | Negative | 1988260 - 1988763 | 18508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
