Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | C1O30_RS08915 | Not Available | Negative | 1951497 - 1952267 | 28831.8 |
| abc transporter permease | C1O30_RS08920 | Not Available | Negative | 1952359 - 1953465 | 40725.2 |
| abc transporter permease | C1O30_RS08925 | Not Available | Negative | 1953521 - 1954711 | 44073.4 |
| atp-binding cassette domain-containing protein | C1O30_RS08930 | Not Available | Negative | 1954695 - 1956446 | 64531.9 |
| secretion protein hlyd | C1O30_RS08935 | Not Available | Negative | 1956436 - 1957440 | 36258.9 |
| atp-dependent rna helicase rhle | C1O30_RS08940 | Not Available | Positive | 1957887 - 1959254 | 50120.6 |
| dmt family transporter | C1O30_RS08945 | Not Available | Negative | 1959259 - 1960155 | 32697.7 |
| helix-turn-helix domain-containing protein | C1O30_RS08950 | Not Available | Positive | 1960383 - 1961258 | 33477.4 |
| peptidase t | C1O30_RS08955 | Not Available | Negative | 1961250 - 1962491 | 45126.5 |
| abc transporter substrate-binding protein | C1O30_RS08960 | Not Available | Positive | 1962606 - 1964201 | 59463.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
