Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C1O30_RS08665 | Not Available | Positive | 1898650 - 1900140 | 51787.6 |
| hypothetical protein | C1O30_RS21595 | Not Available | Negative | 1900219 - 1900395 | 6901.14 |
| hypothetical protein | C1O30_RS08670 | Not Available | Positive | 1900856 - 1901110 | 10275.4 |
| hypothetical protein | C1O30_RS08675 | Not Available | Negative | 1901105 - 1901719 | 23545.4 |
| nad(p)-dependent oxidoreductase | C1O30_RS08680 | Not Available | Negative | 1902188 - 1902844 | 23336.8 |
| dha2 family efflux mfs transporter permease subunit | C1O30_RS08685 | Not Available | Positive | 1903133 - 1904506 | 50083.7 |
| tyrosine-type recombinase/integrase | C1O30_RS08690 | Not Available | Negative | 1904701 - 1905987 | 49383.6 |
| Trna-asn | Not Available | Not Available | Positive | 1906167 - 1906242 | Not Available |
| dgsa anti-repressor mtfa | C1O30_RS08700 | Not Available | Negative | 1906367 - 1907143 | 29466.2 |
| Trna-ser | Not Available | Not Available | Positive | 1907238 - 1907327 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
