Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1O30_RS08515 | Not Available | Positive | 1872246 - 1872566 | 12067.3 |
| hypothetical protein | C1O30_RS21405 | Not Available | Positive | 1872638 - 1872838 | 7509.87 |
| hypothetical protein | C1O30_RS08520 | Not Available | Positive | 1872804 - 1873268 | 17756.3 |
| hnh endonuclease signature motif containing protein | C1O30_RS08525 | Not Available | Positive | 1873361 - 1874146 | 30544.5 |
| nudix domain-containing protein | C1O30_RS21860 | Not Available | Positive | 1874543 - 1874911 | 14427.0 |
| is3 family transposase | C1O30_RS21695 | Not Available | Negative | 1874997 - 1875218 | 8103.35 |
| plasmid replication protein | C1O30_RS08535 | Not Available | Negative | 1875469 - 1875723 | 9679.68 |
| replication initiation protein | C1O30_RS08540 | Not Available | Negative | 1875720 - 1876589 | 33402.1 |
| hypothetical protein | C1O30_RS08545 | Not Available | Positive | 1877225 - 1877719 | 17092.4 |
| dota/tray family protein | C1O30_RS08550 | Not Available | Positive | 1877776 - 1880439 | 93755.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
