Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C1O30_RS08410 | Not Available | Positive | 1856487 - 1857398 | 33491.7 |
| nad(p)/fad-dependent oxidoreductase | C1O30_RS08415 | Not Available | Negative | 1857442 - 1858734 | 45929.4 |
| rida family protein | C1O30_RS08420 | Not Available | Negative | 1858756 - 1859178 | 15081.0 |
| tyramine oxidase subunit b | C1O30_RS08425 | Not Available | Negative | 1859194 - 1860333 | 41272.8 |
| helix-turn-helix domain-containing protein | C1O30_RS08430 | Not Available | Positive | 1860512 - 1861345 | 31494.4 |
| apc family permease | C1O30_RS08435 | Not Available | Positive | 1861490 - 1862872 | 49828.9 |
| amidase family protein | C1O30_RS08440 | Not Available | Negative | 1862968 - 1863333 | 13468.2 |
| hypothetical protein | C1O30_RS08445 | Not Available | Positive | 1864015 - 1864401 | 14903.2 |
| hypothetical protein | C1O30_RS08450 | Not Available | Positive | 1864385 - 1864588 | 7719.36 |
| duf6387 family protein | C1O30_RS08455 | Not Available | Positive | 1864987 - 1865862 | 34220.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
