Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase iii c-terminal domain-containing protein | C1O30_RS00480 | Not Available | Positive | 117634 - 118566 | 35177.4 |
| acyl carrier protein | C1O30_RS00485 | Not Available | Positive | 118580 - 118846 | 9933.74 |
| hypothetical protein | C1O30_RS00490 | Not Available | Positive | 118836 - 119447 | 22683.2 |
| mate family efflux transporter | C1O30_RS00495 | Not Available | Positive | 119470 - 120825 | 48958.5 |
| alpha/beta hydrolase | C1O30_RS00500 | Not Available | Positive | 120812 - 121843 | 38805.8 |
| arac family transcriptional regulator vfme | C1O30_RS00505 | Not Available | Negative | 121947 - 122510 | 21795.2 |
| hypothetical protein | C1O30_RS21740 | Not Available | Positive | 122798 - 122929 | 4616.42 |
| abc transporter atp-binding protein | C1O30_RS00510 | Not Available | Positive | 123077 - 123784 | 25836.0 |
| adop family duplicated permease | C1O30_RS00515 | Not Available | Positive | 123789 - 126224 | 89848.1 |
| two-component system response regulator vfmh | C1O30_RS00520 | Not Available | Positive | 126424 - 127824 | 52593.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
