Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family abc transporter substrate-binding protein | C1O30_RS08150 | Not Available | Positive | 1806285 - 1807091 | 28832.6 |
| methionine abc transporter atp-binding protein | C1O30_RS08155 | Not Available | Positive | 1807095 - 1807886 | 28584.9 |
| methionine abc transporter permease | C1O30_RS08160 | Not Available | Positive | 1807871 - 1808542 | 23865.0 |
| abc transporter substrate-binding protein | C1O30_RS08165 | Not Available | Positive | 1808814 - 1809869 | 39530.8 |
| substrate-binding domain-containing protein | C1O30_RS08170 | Not Available | Positive | 1809869 - 1810588 | 25676.1 |
| is3 family transposase | C1O30_RS08175 | Not Available | Positive | 1810608 - 1810745 | 5187.66 |
| hypothetical protein | C1O30_RS08180 | Not Available | Positive | 1811070 - 1811462 | 13870.3 |
| cdp-diacylglycerol diphosphatase | C1O30_RS08185 | Not Available | Negative | 1811676 - 1812455 | 29033.0 |
| lysr substrate-binding domain-containing protein | C1O30_RS08190 | Not Available | Negative | 1812670 - 1813560 | 32435.8 |
| abc transporter substrate-binding protein | C1O30_RS08195 | Not Available | Positive | 1813727 - 1815268 | 55680.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
