Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | C1O30_RS08100 | Not Available | Positive | 1793205 - 1794227 | 37299.0 |
| alpha-galactosidase | C1O30_RS08105 | Not Available | Positive | 1794376 - 1796505 | 80173.6 |
| mfs transporter | C1O30_RS08110 | Not Available | Positive | 1796559 - 1797839 | 46732.0 |
| c1 family peptidase | C1O30_RS08115 | Not Available | Negative | 1797914 - 1798720 | 30144.9 |
| nad(p)/fad-dependent oxidoreductase | C1O30_RS08120 | Not Available | Positive | 1799047 - 1800378 | 47493.9 |
| gnat family n-acetyltransferase | C1O30_RS08125 | Not Available | Positive | 1800389 - 1801237 | 30555.8 |
| thiol:disulfide interchange protein dsbg | C1O30_RS08130 | Not Available | Negative | 1801368 - 1802120 | 27650.4 |
| ggdef domain-containing protein | C1O30_RS08135 | Not Available | Negative | 1802233 - 1803648 | 52567.5 |
| duf2076 domain-containing protein | C1O30_RS08140 | Not Available | Negative | 1804019 - 1804798 | 27864.8 |
| isopenicillin n synthase family dioxygenase | C1O30_RS08145 | Not Available | Positive | 1805214 - 1806248 | 38511.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
