Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminobutyraldehyde dehydrogenase | C1O30_RS07850 | Not Available | Positive | 1735759 - 1737195 | 51609.9 |
| putrescine aminotransferase | C1O30_RS07855 | Not Available | Positive | 1737475 - 1738893 | 50847.4 |
| hypothetical protein | C1O30_RS07860 | Not Available | Negative | 1738999 - 1739301 | 11970.3 |
| duf3916 domain-containing protein | C1O30_RS07865 | Not Available | Positive | 1739626 - 1740108 | 18510.7 |
| hypothetical protein | C1O30_RS07870 | Not Available | Positive | 1740387 - 1741451 | 41081.0 |
| hypothetical protein | C1O30_RS07875 | Not Available | Positive | 1742037 - 1742288 | 10057.0 |
| low molecular weight protein tyrosine phosphatase family protein | C1O30_RS07880 | Not Available | Positive | 1742260 - 1742607 | 13225.1 |
| phosphonate metabolism transcriptional regulator phnf | C1O30_RS07885 | Not Available | Positive | 1742997 - 1743716 | 27205.7 |
| phosphonate c-p lyase system protein phng | C1O30_RS07890 | Not Available | Positive | 1743717 - 1744166 | 16710.1 |
| phosphonate c-p lyase system protein phnh | C1O30_RS07895 | Not Available | Positive | 1744163 - 1744738 | 20571.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
