Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose utilization transcriptional activator xylr | C1O30_RS00430 | Not Available | Positive | 103669 - 104928 | 48049.3 |
| dj-1/pfpi family protein | C1O30_RS00435 | Not Available | Negative | 104966 - 105538 | 21079.4 |
| metal/formaldehyde-sensitive transcriptional repressor | C1O30_RS00440 | Not Available | Negative | 105808 - 106086 | 10215.5 |
| nickel/cobalt efflux protein rcna | C1O30_RS00445 | Not Available | Positive | 106186 - 107085 | 32854.6 |
| argininosuccinate synthase | C1O30_RS00450 | Not Available | Positive | 107411 - 108760 | 50146.6 |
| marr family winged helix-turn-helix transcriptional regulator | C1O30_RS00455 | Not Available | Negative | 108870 - 109370 | 19151.1 |
| carboxylate/amino acid/amine transporter | C1O30_RS00460 | Not Available | Positive | 109730 - 110623 | 32307.6 |
| pseudouridine-5'-phosphate glycosidase | C1O30_RS00465 | Not Available | Positive | 111017 - 111967 | 33670.2 |
| had family hydrolase | C1O30_RS00470 | Not Available | Positive | 111979 - 112671 | 24156.5 |
| amino acid adenylation domain-containing protein | C1O30_RS00475 | Not Available | Positive | 112819 - 117285 | 165711.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
