Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | C1O30_RS07550 | Not Available | Negative | 1673099 - 1673500 | 15373.6 |
| virb3 family type iv secretion system protein | C1O30_RS21855 | Not Available | Negative | 1673572 - 1673862 | 10461.9 |
| trbc/virb2 family protein | C1O30_RS07560 | Not Available | Negative | 1673873 - 1674148 | 9609.65 |
| lytic transglycosylase domain-containing protein | C1O30_RS07565 | Not Available | Negative | 1674168 - 1674815 | 23355.7 |
| hypothetical protein | C1O30_RS07570 | Not Available | Negative | 1674885 - 1675121 | 8496.14 |
| Trna-asn | Not Available | Not Available | Positive | 1695236 - 1695311 | Not Available |
| beta-galactosidase | C1O30_RS07680 | Not Available | Negative | 1695526 - 1698636 | 118932.0 |
| laci family dna-binding transcriptional regulator | C1O30_RS07685 | Not Available | Negative | 1698826 - 1699899 | 38978.0 |
| aspartate/glutamate racemase family protein | C1O30_RS07690 | Not Available | Negative | 1699987 - 1700703 | 26237.9 |
| hypochlorite stress dna-binding transcriptional regulator hypt | C1O30_RS07695 | Not Available | Positive | 1700854 - 1701747 | 34213.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
