Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ccdb family protein | C1O30_RS07495 | Not Available | Positive | 1664538 - 1664852 | 11463.0 |
| carboxymuconolactone decarboxylase family protein | C1O30_RS07505 | Not Available | Negative | 1665246 - 1666049 | 28677.2 |
| putative quinol monooxygenase | C1O30_RS07510 | Not Available | Negative | 1666065 - 1666760 | 26513.7 |
| aldo/keto reductase | C1O30_RS07515 | Not Available | Negative | 1666820 - 1667839 | 37986.2 |
| nad(p)h-dependent oxidoreductase | C1O30_RS07520 | Not Available | Negative | 1667858 - 1668415 | 20677.7 |
| amidohydrolase family protein | C1O30_RS07525 | Not Available | Negative | 1668568 - 1669602 | 38377.1 |
| aldo/keto reductase | C1O30_RS07530 | Not Available | Negative | 1669705 - 1670652 | 34370.0 |
| type 1 glutamine amidotransferase domain-containing protein | C1O30_RS07535 | Not Available | Negative | 1670736 - 1671425 | 24525.7 |
| superoxide dismutase | C1O30_RS07540 | Not Available | Negative | 1671440 - 1671742 | 11158.5 |
| lysr family transcriptional regulator | C1O30_RS07545 | Not Available | Positive | 1671882 - 1672781 | 33769.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
