Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mltr family transcriptional regulator | C1O30_RS00380 | Not Available | Positive | 89370 - 89981 | 22624.4 |
| methyl-accepting chemotaxis protein | C1O30_RS00385 | Not Available | Negative | 90133 - 92019 | 68239.5 |
| superoxide dismutase | C1O30_RS00390 | Not Available | Negative | 92651 - 93277 | 23215.2 |
| formate dehydrogenase accessory sulfurtransferase fdhd | C1O30_RS00395 | Not Available | Negative | 93550 - 94368 | 29039.8 |
| aldehyde dehydrogenase family protein | C1O30_RS00400 | Not Available | Positive | 94730 - 96265 | 55903.1 |
| xylulokinase | C1O30_RS00405 | Not Available | Negative | 96386 - 97846 | 52611.0 |
| xylose isomerase | C1O30_RS00410 | Not Available | Negative | 98001 - 99320 | 49312.1 |
| d-xylose abc transporter substrate-binding protein | C1O30_RS00415 | Not Available | Positive | 99687 - 100682 | 35813.3 |
| xylose abc transporter atp-binding protein | C1O30_RS00420 | Not Available | Positive | 100762 - 102303 | 56599.1 |
| xylose abc transporter permease xylh | C1O30_RS00425 | Not Available | Positive | 102281 - 103465 | 41618.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
