Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1O30_RS07140 | Not Available | Positive | 1560715 - 1561701 | 36061.8 |
| is200/is605 family transposase | C1O30_RS07145 | Not Available | Positive | 1561883 - 1562320 | 17338.2 |
| response regulator transcription factor | C1O30_RS07150 | Not Available | Negative | 1562394 - 1563047 | 23890.8 |
| sensor histidine kinase | C1O30_RS07155 | Not Available | Negative | 1563040 - 1564110 | 38530.1 |
| aaa-associated domain-containing protein | C1O30_RS07160 | Not Available | Negative | 1564171 - 1565499 | 48733.7 |
| abc transporter permease | C1O30_RS07165 | Not Available | Negative | 1565507 - 1567261 | 64780.4 |
| catalase/peroxidase hpi | C1O30_RS07175 | Not Available | Negative | 1567799 - 1570000 | 79851.5 |
| peptidoglycan glycosyltransferase ftsi | C1O30_RS07180 | Not Available | Positive | 1570530 - 1572230 | 61111.6 |
| class i sam-dependent methyltransferase | C1O30_RS07185 | Not Available | Positive | 1572479 - 1573276 | 30323.8 |
| nickel abc transporter substrate-binding protein | C1O30_RS07190 | Not Available | Positive | 1573442 - 1575016 | 58860.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
