Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid transaminase | C1O30_RS06975 | Not Available | Negative | 1524758 - 1525618 | 31892.1 |
| n-acetyl-d-glu racemase dgca | C1O30_RS06980 | Not Available | Negative | 1525618 - 1526628 | 36701.3 |
| n-acetyltransferase dgcn | C1O30_RS06985 | Not Available | Negative | 1526639 - 1527631 | 35267.5 |
| sensor domain-containing diguanylate cyclase | C1O30_RS06990 | Not Available | Positive | 1528703 - 1530262 | 58545.7 |
| iron uptake transporter permease efeu | C1O30_RS06995 | Not Available | Positive | 1530525 - 1531370 | 31131.6 |
| iron uptake system protein efeo | C1O30_RS07000 | Not Available | Positive | 1531429 - 1532550 | 40876.9 |
| iron uptake transporter deferrochelatase/peroxidase subunit | C1O30_RS07005 | Not Available | Positive | 1532562 - 1533875 | 47776.1 |
| duf1272 domain-containing protein | C1O30_RS07010 | Not Available | Positive | 1533922 - 1534149 | 8317.08 |
| glycine betaine/l-proline transporter prop | C1O30_RS07015 | Not Available | Negative | 1534296 - 1535801 | 54777.2 |
| duf2625 domain-containing protein | C1O30_RS07020 | Not Available | Negative | 1536361 - 1537017 | 24835.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
