Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | C1O30_RS06925 | Not Available | Positive | 1508895 - 1510232 | 49248.6 |
| type ivb secretion system protein icmh/dotu | C1O30_RS06930 | Not Available | Positive | 1510249 - 1511025 | 30087.1 |
| type vi secretion system atpase tssh | C1O30_RS06935 | Not Available | Positive | 1511041 - 1513641 | 95383.3 |
| sigma-54 interaction domain-containing protein | C1O30_RS06940 | Not Available | Positive | 1513644 - 1515182 | 56845.5 |
| type vi secretion system-associated protein vasi | C1O30_RS06945 | Not Available | Positive | 1515182 - 1515745 | 20457.2 |
| type vi secretion system protein tssa | C1O30_RS06950 | Not Available | Positive | 1515757 - 1517193 | 52128.2 |
| type vi secretion system membrane subunit tssm | C1O30_RS06955 | Not Available | Positive | 1517219 - 1520716 | 132159.0 |
| vasl domain-containing protein | C1O30_RS06960 | Not Available | Positive | 1520769 - 1522202 | 54609.7 |
| tetratricopeptide repeat protein | C1O30_RS06965 | Not Available | Positive | 1522284 - 1523654 | 50351.0 |
| dknyy domain-containing protein | C1O30_RS06970 | Not Available | Positive | 1523759 - 1524691 | 34452.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
