Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smi1/knr4 family protein | C1O30_RS06875 | Not Available | Positive | 1498193 - 1498636 | 16780.7 |
| duf6882 domain-containing protein | C1O30_RS06880 | Not Available | Negative | 1498819 - 1499346 | 19261.7 |
| m20 aminoacylase family protein | C1O30_RS06885 | Not Available | Positive | 1499662 - 1500819 | 41485.9 |
| type vi secretion system contractile sheath small subunit | C1O30_RS06890 | Not Available | Positive | 1501942 - 1502445 | 18548.3 |
| type vi secretion system contractile sheath large subunit | C1O30_RS06895 | Not Available | Positive | 1502477 - 1503955 | 55245.7 |
| type vi secretion system baseplate subunit tsse | C1O30_RS06900 | Not Available | Positive | 1503962 - 1504393 | 16273.3 |
| type vi secretion system baseplate subunit tssf | C1O30_RS06905 | Not Available | Positive | 1504396 - 1506162 | 66968.1 |
| type vi secretion system baseplate subunit tssg | C1O30_RS06910 | Not Available | Positive | 1506126 - 1507139 | 38214.4 |
| type vi secretion system-associated fha domain protein tagh | C1O30_RS06915 | Not Available | Positive | 1507142 - 1508356 | 45177.9 |
| type vi secretion system lipoprotein tssj | C1O30_RS06920 | Not Available | Positive | 1508356 - 1508892 | 19868.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
