Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1O30_RS06725 | Not Available | Positive | 1465841 - 1467355 | 55824.7 |
| diguanylate cyclase | C1O30_RS06730 | Not Available | Positive | 1467971 - 1469035 | 39964.2 |
| gntr family transcriptional regulator | C1O30_RS06735 | Not Available | Negative | 1469042 - 1469938 | 34612.0 |
| hypothetical protein | C1O30_RS06740 | Not Available | Positive | 1470173 - 1470652 | 17219.7 |
| sdr family oxidoreductase | C1O30_RS06745 | Not Available | Positive | 1470809 - 1471585 | 27271.7 |
| virk/ybjx family protein | C1O30_RS06750 | Not Available | Negative | 1471649 - 1472599 | 36010.7 |
| dps family protein | C1O30_RS06755 | Not Available | Negative | 1472992 - 1473477 | 18174.8 |
| hypothetical protein | C1O30_RS06760 | Not Available | Positive | 1474252 - 1474590 | 13427.6 |
| amp nucleosidase | C1O30_RS06765 | Not Available | Negative | 1474668 - 1476125 | 53902.9 |
| hcp family type vi secretion system effector | C1O30_RS06770 | Not Available | Positive | 1476555 - 1477073 | 19126.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
