Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase | C1O30_RS06675 | Not Available | Positive | 1453910 - 1454917 | 37277.2 |
| nucleotide sugar dehydrogenase | C1O30_RS06680 | Not Available | Positive | 1455027 - 1456193 | 43296.1 |
| sugar phosphate nucleotidyltransferase | C1O30_RS06685 | Not Available | Positive | 1456281 - 1457180 | 32540.7 |
| glycosyltransferase | C1O30_RS06690 | Not Available | Positive | 1457328 - 1458350 | 38776.8 |
| nadp-dependent phosphogluconate dehydrogenase | C1O30_RS06695 | Not Available | Positive | 1458538 - 1459944 | 51479.1 |
| hypothetical protein | C1O30_RS06700 | Not Available | Positive | 1460322 - 1460612 | 9131.77 |
| yjbf family lipoprotein | C1O30_RS06705 | Not Available | Positive | 1460728 - 1461360 | 23687.3 |
| capsule biosynthesis gfcc family protein | C1O30_RS06710 | Not Available | Positive | 1461370 - 1462149 | 28944.5 |
| yjbh domain-containing protein | C1O30_RS06715 | Not Available | Positive | 1462149 - 1464290 | 79762.9 |
| hypothetical protein | C1O30_RS06720 | Not Available | Negative | 1464369 - 1465484 | 40571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
