Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | C1O30_RS00330 | Not Available | Positive | 75497 - 76315 | 30789.6 |
| urea carboxylase | C1O30_RS00335 | Not Available | Negative | 76456 - 80037 | 130491.0 |
| urea amidolyase associated protein uaap2 | C1O30_RS00340 | Not Available | Negative | 80138 - 80773 | 23512.7 |
| urea amidolyase associated protein uaap1 | C1O30_RS00345 | Not Available | Negative | 80776 - 81516 | 27713.8 |
| abc transporter atp-binding protein | C1O30_RS00350 | Not Available | Negative | 81533 - 82312 | 29165.5 |
| abc transporter permease | C1O30_RS00355 | Not Available | Negative | 82340 - 83152 | 29758.0 |
| putative urea abc transporter substrate-binding protein | C1O30_RS00360 | Not Available | Negative | 83169 - 84224 | 37531.9 |
| duf3053 domain-containing protein | C1O30_RS00365 | Not Available | Positive | 84932 - 85642 | 26474.6 |
| pts mannitol transporter subunit iicba | C1O30_RS00370 | Not Available | Positive | 86129 - 88036 | 66855.0 |
| mannitol-1-phosphate 5-dehydrogenase | C1O30_RS00375 | Not Available | Positive | 88144 - 89292 | 41101.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
