Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum abc transporter atp-binding protein modc | C1O30_RS06525 | Not Available | Positive | 1417393 - 1418451 | 38829.4 |
| pyridoxal phosphatase | C1O30_RS06530 | Not Available | Negative | 1418501 - 1419322 | 30424.2 |
| 6-phosphogluconolactonase | C1O30_RS06535 | Not Available | Positive | 1419498 - 1420493 | 35944.2 |
| lvivd repeat-containing protein | C1O30_RS06540 | Not Available | Negative | 1420555 - 1421805 | 46186.5 |
| sugar abc transporter substrate-binding protein | C1O30_RS06545 | Not Available | Negative | 1421830 - 1422906 | 38381.9 |
| virk family protein | C1O30_RS06550 | Not Available | Negative | 1423154 - 1423585 | 15534.5 |
| methionine--trna ligase | C1O30_RS06555 | Not Available | Negative | 1423837 - 1425867 | 75569.0 |
| iron-sulfur cluster carrier protein apbc | C1O30_RS06560 | Not Available | Positive | 1426170 - 1427279 | 39617.2 |
| uridine kinase | C1O30_RS06565 | Not Available | Positive | 1427592 - 1428233 | 24512.9 |
| dctp deaminase | C1O30_RS06570 | Not Available | Positive | 1428336 - 1428917 | 21200.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
