Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 1396140 - 1396215 | Not Available |
| duf554 domain-containing protein | C1O30_RS06430 | Not Available | Positive | 1396473 - 1397189 | 25368.4 |
| quinolinate synthase nada | C1O30_RS06435 | Not Available | Positive | 1397392 - 1398438 | 38315.1 |
| nicotinamide riboside transporter pnuc | C1O30_RS06440 | Not Available | Positive | 1398471 - 1399196 | 27235.7 |
| 3-deoxy-7-phosphoheptulonate synthase arog | C1O30_RS06445 | Not Available | Positive | 1399468 - 1400520 | 38414.2 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | C1O30_RS06450 | Not Available | Negative | 1400596 - 1401348 | 28573.9 |
| efflux rnd transporter permease subunit | C1O30_RS06455 | Not Available | Negative | 1401501 - 1404629 | 114277.0 |
| efflux rnd transporter periplasmic adaptor subunit | C1O30_RS06460 | Not Available | Negative | 1404626 - 1406137 | 54991.6 |
| tolc family protein | C1O30_RS06465 | Not Available | Negative | 1406134 - 1407393 | 46236.9 |
| copper-binding protein | C1O30_RS06470 | Not Available | Negative | 1407406 - 1407816 | 14817.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
