Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | C1O30_RS00280 | Not Available | Positive | 62180 - 62986 | 27882.3 |
| glycine--trna ligase subunit alpha | C1O30_RS00285 | Not Available | Positive | 63154 - 64068 | 34844.4 |
| glycine--trna ligase subunit beta | C1O30_RS00290 | Not Available | Positive | 64078 - 66147 | 76306.2 |
| hypothetical protein | C1O30_RS00295 | Not Available | Negative | 66227 - 67222 | 38288.4 |
| abc transporter atp-binding protein | C1O30_RS00300 | Not Available | Negative | 67489 - 68598 | 40581.1 |
| rok family transcriptional regulator | C1O30_RS00305 | Not Available | Negative | 68935 - 70134 | 42948.0 |
| rok family protein | C1O30_RS00310 | Not Available | Positive | 70384 - 71505 | 39484.3 |
| glycogen debranching protein | C1O30_RS00315 | Not Available | Positive | 71502 - 73259 | 65741.5 |
| abc transporter substrate-binding protein | C1O30_RS00320 | Not Available | Positive | 73312 - 74556 | 46142.1 |
| carbohydrate abc transporter permease | C1O30_RS00325 | Not Available | Positive | 74553 - 75500 | 35177.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
