Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(met) cytidine acetyltransferase tmca | C1O30_RS05965 | Not Available | Positive | 1307578 - 1309596 | 75071.1 |
| esterase | C1O30_RS05970 | Not Available | Positive | 1309835 - 1310521 | 25456.5 |
| ypfn family protein | C1O30_RS05975 | Not Available | Negative | 1310647 - 1310835 | 7503.08 |
| m15 family metallopeptidase | C1O30_RS05980 | Not Available | Negative | 1310973 - 1311656 | 25459.8 |
| succinyl-diaminopimelate desuccinylase | C1O30_RS05985 | Not Available | Negative | 1311653 - 1312780 | 41086.1 |
| arsc family reductase | C1O30_RS05990 | Not Available | Negative | 1312761 - 1313144 | 14698.5 |
| protein ypfm | C1O30_RS21840 | Not Available | Positive | 1313374 - 1313433 | 2351.94 |
| transcription antiterminator/rna stability regulator cspe | C1O30_RS05995 | Not Available | Positive | 1314158 - 1314367 | 7395.75 |
| fluoride efflux transporter crcb | C1O30_RS06000 | Not Available | Negative | 1314431 - 1314814 | 13786.2 |
| deaminated glutathione amidase | C1O30_RS06005 | Not Available | Positive | 1315026 - 1315814 | 28687.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
