Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil permease | C1O30_RS05915 | Not Available | Positive | 1298663 - 1299976 | 45872.8 |
| dnaa inactivator hda | C1O30_RS05920 | Not Available | Positive | 1300092 - 1300799 | 26718.2 |
| arsenate reductase (glutaredoxin) | C1O30_RS05925 | Not Available | Negative | 1300809 - 1301165 | 13219.3 |
| tetratricopeptide repeat protein | C1O30_RS05930 | Not Available | Negative | 1301180 - 1302643 | 53520.7 |
| thioredoxin-dependent thiol peroxidase | C1O30_RS05935 | Not Available | Negative | 1302835 - 1303302 | 17427.7 |
| glycine cleavage system transcriptional repressor | C1O30_RS05940 | Not Available | Negative | 1303305 - 1303874 | 20870.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C1O30_RS05945 | Not Available | Positive | 1304022 - 1304900 | 31277.8 |
| outer membrane protein assembly factor bamc | C1O30_RS05950 | Not Available | Positive | 1304917 - 1305957 | 37926.7 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C1O30_RS05955 | Not Available | Positive | 1306079 - 1306792 | 26833.4 |
| duf441 domain-containing protein | C1O30_RS05960 | Not Available | Positive | 1307106 - 1307558 | 15538.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
