Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | C1O30_RS05860 | Not Available | Negative | 1287344 - 1288453 | 41088.8 |
| amino acid abc transporter permease | C1O30_RS05865 | Not Available | Negative | 1288629 - 1289474 | 30685.3 |
| abc transporter substrate-binding protein | C1O30_RS05870 | Not Available | Negative | 1289474 - 1290295 | 29912.1 |
| galactose/methyl galactoside abc transporter permease mglc | C1O30_RS05875 | Not Available | Negative | 1290545 - 1291555 | 35799.6 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | C1O30_RS05880 | Not Available | Negative | 1291575 - 1293095 | 56627.0 |
| galactose/glucose abc transporter substrate-binding protein mglb | C1O30_RS05885 | Not Available | Negative | 1293217 - 1294212 | 35635.9 |
| hth-type transcriptional regulator gals | C1O30_RS05895 | Not Available | Negative | 1294626 - 1295624 | 36482.1 |
| phosphoribosylglycinamide formyltransferase | C1O30_RS05900 | Not Available | Negative | 1295903 - 1296541 | 23098.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | C1O30_RS05905 | Not Available | Negative | 1296541 - 1297578 | 36899.2 |
| uracil phosphoribosyltransferase | C1O30_RS05910 | Not Available | Positive | 1297849 - 1298475 | 22537.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
