Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C1O30_RS00230 | Not Available | Negative | 50353 - 51213 | 30222.6 |
| abc transporter permease | C1O30_RS00235 | Not Available | Negative | 51215 - 52156 | 33446.0 |
| tigr04028 family abc transporter substrate-binding protein | C1O30_RS00240 | Not Available | Negative | 52183 - 53826 | 59617.6 |
| duf1471 domain-containing protein | C1O30_RS00245 | Not Available | Positive | 54154 - 54405 | 8407.81 |
| ferric reductase-like transmembrane domain-containing protein | C1O30_RS00250 | Not Available | Negative | 54638 - 55912 | 47980.9 |
| valine--pyruvate transaminase | C1O30_RS00255 | Not Available | Negative | 56510 - 57769 | 47105.8 |
| aldose 1-epimerase family protein | C1O30_RS00260 | Not Available | Positive | 58163 - 59371 | 44464.9 |
| glyoxylate/hydroxypyruvate reductase ghrb | C1O30_RS00265 | Not Available | Negative | 59444 - 60406 | 34927.4 |
| n-acetyltransferase | C1O30_RS00270 | Not Available | Negative | 60905 - 61360 | 17523.8 |
| dna-3-methyladenine glycosylase i | C1O30_RS00275 | Not Available | Negative | 61357 - 61917 | 21076.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
