Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | C1O30_RS05400 | Not Available | Positive | 1178493 - 1178966 | 16452.8 |
| transcription antitermination factor nusb | C1O30_RS05405 | Not Available | Positive | 1178989 - 1179408 | 15598.8 |
| thiamine-phosphate kinase | C1O30_RS05410 | Not Available | Positive | 1179470 - 1180444 | 34778.3 |
| phosphatidylglycerophosphatase a | C1O30_RS05415 | Not Available | Positive | 1180425 - 1180937 | 18763.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | C1O30_RS05420 | Not Available | Negative | 1181012 - 1182874 | 67492.5 |
| (2e,6e)-farnesyl diphosphate synthase | C1O30_RS05425 | Not Available | Negative | 1182907 - 1183818 | 32578.0 |
| exodeoxyribonuclease vii small subunit | C1O30_RS05430 | Not Available | Negative | 1183815 - 1184063 | 9145.73 |
| trna uracil 4-sulfurtransferase thii | C1O30_RS05435 | Not Available | Positive | 1184330 - 1185778 | 54848.1 |
| protein deglycase yajl | C1O30_RS05440 | Not Available | Negative | 1185845 - 1186441 | 21048.5 |
| 2-dehydropantoate 2-reductase | C1O30_RS05445 | Not Available | Negative | 1186404 - 1187324 | 33985.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
