Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C1O30_RS05345 | Not Available | Positive | 1165737 - 1166804 | 38995.6 |
| trna guanosine(34) transglycosylase tgt | C1O30_RS05350 | Not Available | Positive | 1166893 - 1168056 | 43813.5 |
| preprotein translocase subunit yajc | C1O30_RS05355 | Not Available | Positive | 1168123 - 1168458 | 12009.8 |
| protein translocase subunit secd | C1O30_RS05360 | Not Available | Positive | 1168487 - 1170334 | 66624.2 |
| protein translocase subunit secf | C1O30_RS05365 | Not Available | Positive | 1170345 - 1171316 | 35322.7 |
| is4 family transposase | C1O30_RS05375 | Not Available | Positive | 1171445 - 1172767 | 50467.3 |
| duf3251 domain-containing protein | C1O30_RS05380 | Not Available | Negative | 1172821 - 1173390 | 20555.7 |
| magnesium-translocating p-type atpase | C1O30_RS05385 | Not Available | Negative | 1173569 - 1176280 | 100662.0 |
| transcriptional regulator nrdr | C1O30_RS05390 | Not Available | Positive | 1176744 - 1177193 | 17111.8 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C1O30_RS05395 | Not Available | Positive | 1177259 - 1178371 | 40038.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
