Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20 family metallopeptidase | C1O30_RS05245 | Not Available | Negative | 1139291 - 1140718 | 52482.2 |
| lysr family transcriptional regulator | C1O30_RS05250 | Not Available | Positive | 1140939 - 1141889 | 35007.6 |
| had family hydrolase | C1O30_RS05255 | Not Available | Negative | 1141922 - 1142578 | 24944.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | C1O30_RS05260 | Not Available | Positive | 1143139 - 1144239 | 41466.8 |
| asparaginase | C1O30_RS05265 | Not Available | Positive | 1144546 - 1145592 | 37577.4 |
| shikimate kinase arol | C1O30_RS05270 | Not Available | Positive | 1145956 - 1146477 | 18987.9 |
| pyrimidine/purine nucleoside phosphorylase | C1O30_RS05275 | Not Available | Positive | 1146513 - 1146797 | 10262.2 |
| methyl-accepting chemotaxis protein | C1O30_RS05280 | Not Available | Positive | 1147278 - 1149068 | 62860.3 |
| recombination-associated protein rdgc | C1O30_RS05285 | Not Available | Negative | 1149120 - 1150031 | 33617.5 |
| fructokinase | C1O30_RS05290 | Not Available | Positive | 1150242 - 1151153 | 32506.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
