Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide 5'-monophosphate nucleosidase ppnn | C1O30_RS04855 | Not Available | Negative | 1051376 - 1052740 | 50769.2 |
| secy-interacting protein | C1O30_RS04860 | Not Available | Positive | 1053127 - 1053675 | 20652.8 |
| yqcc family protein | C1O30_RS04865 | Not Available | Positive | 1054365 - 1054685 | 12042.5 |
| trna pseudouridine(65) synthase truc | C1O30_RS04870 | Not Available | Positive | 1054688 - 1055473 | 29753.8 |
| flavodoxin | C1O30_RS04875 | Not Available | Positive | 1055492 - 1055944 | 16196.1 |
| duf3461 family protein | C1O30_RS04880 | Not Available | Negative | 1056080 - 1056466 | 15067.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C1O30_RS04885 | Not Available | Negative | 1056592 - 1057416 | 29852.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | C1O30_RS04890 | Not Available | Negative | 1057491 - 1060175 | 103159.0 |
| type i methionyl aminopeptidase | C1O30_RS04895 | Not Available | Negative | 1060227 - 1061021 | 29461.5 |
| 30s ribosomal protein s2 | C1O30_RS04900 | Not Available | Positive | 1061387 - 1062112 | 26765.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
