Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | C1O30_RS04760 | Not Available | Positive | 1034028 - 1034414 | 14417.5 |
| pitrilysin | C1O30_RS04765 | Not Available | Positive | 1034456 - 1037332 | 107058.0 |
| amino-acid n-acetyltransferase | C1O30_RS04770 | Not Available | Negative | 1037479 - 1038804 | 49366.6 |
| n-acetylmuramoyl-l-alanine amidase amic | C1O30_RS04775 | Not Available | Positive | 1039028 - 1040266 | 45974.3 |
| Trna-met | Not Available | Not Available | Positive | 1040330 - 1040406 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1040446 - 1040522 | Not Available |
| murein transglycosylase a | C1O30_RS04790 | Not Available | Positive | 1040735 - 1041874 | 41500.3 |
| gnat family n-acetyltransferase | C1O30_RS04795 | Not Available | Negative | 1041953 - 1042294 | 13043.5 |
| hypothetical protein | C1O30_RS21835 | Not Available | Negative | 1042266 - 1042472 | 7605.92 |
| gnat family n-acetyltransferase | C1O30_RS04800 | Not Available | Negative | 1042541 - 1043020 | 17658.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
