Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygdi/ygdr family lipoprotein | C1O30_RS04705 | Not Available | Negative | 1024786 - 1025004 | 7763.39 |
| terc family protein | C1O30_RS04710 | Not Available | Negative | 1025158 - 1025874 | 26367.3 |
| dna mismatch repair endonuclease muth | C1O30_RS04715 | Not Available | Negative | 1026049 - 1026735 | 25311.7 |
| rna pyrophosphohydrolase | C1O30_RS04725 | Not Available | Positive | 1027507 - 1028034 | 20727.0 |
| phosphoenolpyruvate--protein phosphotransferase | C1O30_RS04730 | Not Available | Positive | 1028049 - 1030295 | 83773.5 |
| prolipoprotein diacylglyceryl transferase | C1O30_RS04735 | Not Available | Positive | 1030519 - 1031382 | 32359.1 |
| thymidylate synthase | C1O30_RS04740 | Not Available | Positive | 1031414 - 1032208 | 30432.4 |
| prepilin peptidase-dependent protein | C1O30_RS04745 | Not Available | Positive | 1032464 - 1032955 | 18025.0 |
| prepilin peptidase-dependent protein | C1O30_RS04750 | Not Available | Positive | 1032949 - 1033542 | 21828.2 |
| ygdb family protein | C1O30_RS04755 | Not Available | Positive | 1033640 - 1034044 | 15270.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
